WebPropagate: A Web Server for Network Propagation

Hadas Biran; Tovi Almozlino; Martin Kupiec; Roded Sharan

doi:10.1016/j.jmb.2018.02.025

WebPropagate: A Web Server for Network Propagation

Hadas Biran, Tovi Almozlino, Martin Kupiec, Roded Sharan

Tel Aviv University

Research output: Contribution to journal › Article › peer-review

Abstract

Network propagation is a powerful tool for genetic analysis which is widely used to identify genes and genetic modules that underlie a process of interest. Here we provide a graphical, web-based platform (http://anat.cs.tau.ac.il/WebPropagate/) in which researchers can easily apply variants of this method to data sets of interest using up-to-date networks of protein–protein interactions in several organisms.

Original language	English
Pages (from-to)	2231-2236
Number of pages	6
Journal	Journal of Molecular Biology
Volume	430
Issue number	15
DOIs	https://doi.org/10.1016/j.jmb.2018.02.025
State	Published - 20 Jul 2018

Keywords

gene prioritization
network diffusion
p-value computation
protein–protein interaction network
subnetwork inference

All Science Journal Classification (ASJC) codes

Molecular Biology
Biophysics
Structural Biology

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10.1016/j.jmb.2018.02.025

Cite this

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title = "WebPropagate: A Web Server for Network Propagation",

abstract = "Network propagation is a powerful tool for genetic analysis which is widely used to identify genes and genetic modules that underlie a process of interest. Here we provide a graphical, web-based platform (http://anat.cs.tau.ac.il/WebPropagate/) in which researchers can easily apply variants of this method to data sets of interest using up-to-date networks of protein–protein interactions in several organisms.",

keywords = "gene prioritization, network diffusion, p-value computation, protein–protein interaction network, subnetwork inference",

author = "Hadas Biran and Tovi Almozlino and Martin Kupiec and Roded Sharan",

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year = "2018",

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doi = "10.1016/j.jmb.2018.02.025",

language = "الإنجليزيّة",

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T2 - A Web Server for Network Propagation

AU - Biran, Hadas

AU - Almozlino, Tovi

AU - Kupiec, Martin

AU - Sharan, Roded

PY - 2018/7/20

Y1 - 2018/7/20

N2 - Network propagation is a powerful tool for genetic analysis which is widely used to identify genes and genetic modules that underlie a process of interest. Here we provide a graphical, web-based platform (http://anat.cs.tau.ac.il/WebPropagate/) in which researchers can easily apply variants of this method to data sets of interest using up-to-date networks of protein–protein interactions in several organisms.

AB - Network propagation is a powerful tool for genetic analysis which is widely used to identify genes and genetic modules that underlie a process of interest. Here we provide a graphical, web-based platform (http://anat.cs.tau.ac.il/WebPropagate/) in which researchers can easily apply variants of this method to data sets of interest using up-to-date networks of protein–protein interactions in several organisms.

KW - gene prioritization

KW - network diffusion

KW - p-value computation

KW - protein–protein interaction network

KW - subnetwork inference

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U2 - 10.1016/j.jmb.2018.02.025

DO - 10.1016/j.jmb.2018.02.025

M3 - مقالة

SN - 0022-2836

VL - 430

SP - 2231

EP - 2236

JO - Journal of Molecular Biology

JF - Journal of Molecular Biology

IS - 15

ER -

WebPropagate: A Web Server for Network Propagation

Abstract

Keywords

All Science Journal Classification (ASJC) codes

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