Abstract
We present a compressed representation of tries based on top tree compression [ICALP 2013] that works on a standard, comparison-based, pointer machine model of computation and supports efficient prefix search queries. Namely, we show how to preprocess a set of strings of total length n over an alphabet of size σ into a compressed data structure of worst-case optimal size O(n/ log σn) that given a pattern string P of length m determines if P is a prefix of one of the strings in time O(min (mlog σ, m+ log n)). We show that this query time is in fact optimal regardless of the size of the data structure. Existing solutions either use Ω (n) space or rely on word RAM techniques, such as tabulation, hashing, address arithmetic, or word-level parallelism, and hence do not work on a pointer machine. Our result is the first solution on a pointer machine that achieves worst-case o(n) space. Along the way, we develop several interesting data structures that work on a pointer machine and are of independent interest. These include an optimal data structures for random access to a grammar-compressed string and an optimal data structure for a variant of the level ancestor problem.
| Original language | American English |
|---|---|
| Pages (from-to) | 3602-3628 |
| Number of pages | 27 |
| Journal | Algorithmica |
| Volume | 83 |
| Issue number | 12 |
| DOIs | |
| State | Published - 2021 |
Keywords
- Pattern matching
- Pointer machine
- Top trees
- Tree compression
All Science Journal Classification (ASJC) codes
- General Computer Science
- Applied Mathematics
- Computer Science Applications
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