TY - GEN
T1 - Symmetry-based mitosis detection in time-lapse microscopy
AU - Gilad, Topaz
AU - Bray, Mark Anthony
AU - Carpenter, Anne E.
AU - Raviv, Tammy Riklin
N1 - Publisher Copyright: © 2015 IEEE.
PY - 2015/7/21
Y1 - 2015/7/21
N2 - Providing a general framework for mitosis detection is challenging. The variability of the visual traits and temporal features which classify the event of cell division is huge due to the numerous cell types, perturbations, imaging techniques and protocols used in microscopy imaging analysis studies. The commonly used machine learning techniques are based on the extraction of comprehensive sets of discriminative features from labeled examples and therefore do not apply to general cases as they are restricted to trained datasets. We present a robust mitotic event detection algorithm that accommodates the difficulty of the different cell appearances and dynamics. Addressing symmetrical cell divisions, we consider the anaphase stage, immediately after the DNA material divides, at which the two daughter cells are approximately identical. Having detected pairs of candidate daughter cells, based on their association to potential mother cells, we look for the respective symmetry axes. Mitotic event is detected based on the calculated measure of symmetry of each candidate pair of cells. Promising mitosis detection results for four different time-lapse microscopy datasets were obtained.
AB - Providing a general framework for mitosis detection is challenging. The variability of the visual traits and temporal features which classify the event of cell division is huge due to the numerous cell types, perturbations, imaging techniques and protocols used in microscopy imaging analysis studies. The commonly used machine learning techniques are based on the extraction of comprehensive sets of discriminative features from labeled examples and therefore do not apply to general cases as they are restricted to trained datasets. We present a robust mitotic event detection algorithm that accommodates the difficulty of the different cell appearances and dynamics. Addressing symmetrical cell divisions, we consider the anaphase stage, immediately after the DNA material divides, at which the two daughter cells are approximately identical. Having detected pairs of candidate daughter cells, based on their association to potential mother cells, we look for the respective symmetry axes. Mitotic event is detected based on the calculated measure of symmetry of each candidate pair of cells. Promising mitosis detection results for four different time-lapse microscopy datasets were obtained.
KW - High-throughput images
KW - Mitosis detection
KW - Symmetry
KW - Time-lapse Microscopy
UR - http://www.scopus.com/inward/record.url?scp=84944329673&partnerID=8YFLogxK
U2 - 10.1109/ISBI.2015.7163841
DO - 10.1109/ISBI.2015.7163841
M3 - Conference contribution
T3 - Proceedings - International Symposium on Biomedical Imaging
SP - 164
EP - 167
BT - 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015
T2 - 12th IEEE International Symposium on Biomedical Imaging, ISBI 2015
Y2 - 16 April 2015 through 19 April 2015
ER -