Survey for a Decade of Coding for DNA Storage

Omer Sabary; Han Mao Kiah; Paul H. Siegel; Eitan Yaakobi

doi:10.1109/TMBMC.2024.3403488

Survey for a Decade of Coding for DNA Storage

Omer Sabary, Han Mao Kiah, Paul H. Siegel, Eitan Yaakobi

Computer Science

Technion - Israel Institute of Technology

Research output: Contribution to journal › Article › peer-review

Abstract

Advancements in DNA synthesis and sequencing technologies have enabled the storage of data on synthetic DNA strands. However, realizing its potential relies on the design of tailored coding techniques and algorithms. This survey paper offers an overview of past contributions, accompanied by a special issue that showcases recent developments in this field.

Original language	English
Pages (from-to)	253-271
Number of pages	19
Journal	IEEE Transactions on Molecular, Biological, and Multi-Scale Communications
Volume	10
Issue number	2
DOIs	https://doi.org/10.1109/TMBMC.2024.3403488
State	Published - 1 Jun 2024

Keywords

DNA-based data storage
balanced codes
constrained coding
deletions
homopolymer runs
insertions
sequence reconstruction problem
sequencing
synthesis

All Science Journal Classification (ASJC) codes

Biotechnology
Bioengineering
Modelling and Simulation
Computer Networks and Communications
Electrical and Electronic Engineering

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10.1109/TMBMC.2024.3403488

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abstract = "Advancements in DNA synthesis and sequencing technologies have enabled the storage of data on synthetic DNA strands. However, realizing its potential relies on the design of tailored coding techniques and algorithms. This survey paper offers an overview of past contributions, accompanied by a special issue that showcases recent developments in this field.",

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KW - deletions

KW - homopolymer runs

KW - insertions

KW - sequence reconstruction problem

KW - sequencing

KW - synthesis

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Survey for a Decade of Coding for DNA Storage

Abstract

Keywords

All Science Journal Classification (ASJC) codes

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