TY - JOUR
T1 - Nonsense mutation-dependent reinitiation of translation in mammalian cells
AU - Cohen, Sarit
AU - Kramarski, Lior
AU - Levi, Shahar
AU - Deshe, Noa
AU - David, Oshrit Ben
AU - Arbely, Eyal
N1 - Funding Information: European Research Council (ERC) under the European Union Horizon 2020 research and innovation programme [678461 to E.A.]; Israel Science Foundation [807/15 to E.A.]. Funding for open access charge: H2020 ERC grant. Conflict of interest statement. None declared. Publisher Copyright: © The Author(s) 2019
PY - 2019/7/9
Y1 - 2019/7/9
N2 - In-frame stop codons mark the termination of translation. However, post-termination ribosomes can reinitiate translation at downstream AUG codons. In mammals, reinitiation is most efficient when the termination codon is positioned close to the 5'-proximal initiation site and around 78 bases upstream of the reinitiation site. The phenomenon was studied mainly in the context of open reading frames (ORFs) found within the 5'-untranslated region, or polycicstronic viral mRNA. We hypothesized that reinitiation of translation following nonsense mutations within the main ORF of p53 can promote the expression of N-truncated p53 isoforms such as ∆40, ∆133 and ∆160p53. Here, we report that expression of all known N-truncated p53 isoforms by reinitiation is mechanistically feasible, including expression of the previously unidentified variant ∆66p53. Moreover, we found that significant reinitiation of translation can be promoted by nonsense mutations located even 126 codons downstream of the 5'-proximal initiation site, and observed when the reinitiation site is positioned between 6 and 243 bases downstream of the nonsense mutation. We also demonstrate that reinitiation can stabilise p53 mRNA transcripts with a premature termination codon, by allowing such transcripts to evade the nonsense mediated decay pathway. Our data suggest that the expression of N-truncated proteins from alleles carrying a premature termination codon is more prevalent than previously thought.
AB - In-frame stop codons mark the termination of translation. However, post-termination ribosomes can reinitiate translation at downstream AUG codons. In mammals, reinitiation is most efficient when the termination codon is positioned close to the 5'-proximal initiation site and around 78 bases upstream of the reinitiation site. The phenomenon was studied mainly in the context of open reading frames (ORFs) found within the 5'-untranslated region, or polycicstronic viral mRNA. We hypothesized that reinitiation of translation following nonsense mutations within the main ORF of p53 can promote the expression of N-truncated p53 isoforms such as ∆40, ∆133 and ∆160p53. Here, we report that expression of all known N-truncated p53 isoforms by reinitiation is mechanistically feasible, including expression of the previously unidentified variant ∆66p53. Moreover, we found that significant reinitiation of translation can be promoted by nonsense mutations located even 126 codons downstream of the 5'-proximal initiation site, and observed when the reinitiation site is positioned between 6 and 243 bases downstream of the nonsense mutation. We also demonstrate that reinitiation can stabilise p53 mRNA transcripts with a premature termination codon, by allowing such transcripts to evade the nonsense mediated decay pathway. Our data suggest that the expression of N-truncated proteins from alleles carrying a premature termination codon is more prevalent than previously thought.
UR - http://www.scopus.com/inward/record.url?scp=85069294019&partnerID=8YFLogxK
U2 - https://doi.org/10.1093/NAR/GKZ319
DO - https://doi.org/10.1093/NAR/GKZ319
M3 - Article
C2 - 31045216
SN - 0305-1048
VL - 47
SP - 6330
EP - 6338
JO - Nucleic acids research
JF - Nucleic acids research
IS - 12
ER -