TY - JOUR
T1 - Communication between viruses guides lysis-lysogeny decisions
AU - Erez, Zohar
AU - Steinberger-Levy, Ida
AU - Shamir, Maya
AU - Doron, Shany
AU - Stokar Avihail, Avihail, Avigail
AU - Peleg, Yoav
AU - Melamed, Sarah
AU - Leavitt, Azita
AU - Savidor, Alon
AU - Albeck, Shira
AU - Amitai, Gil
AU - Sorek, Rotem
N1 - We thank J. Peters and C. Gross for sharing the Bacillus dCas9 system; A. Eldar for the oppD mutant and for advice on quorum sensing systems in Bacilli; I. Kolodkin-Gal for the 3610 strain; Y. Levin from the de Botton Institute for Protein Profiling for assistance in mass spectrometry; D. Fass and G. Armoni for advice regarding protein structure; and H. Sharir for assistance in the microscale thermophoresis analysis. We also thank D. Pollack, I. Kolodkin-Gal, O. Dym and T. Unger for support and discussion throughout the study. R.S. was supported, in part, by the Israel Science Foundation (personal grants 1303/12, 1360/16 and I-CORE grant 1796/12), the European Research Council (ERC) (grants ERC-StG 260432 and ERC-CoG 681203), Human Frontier Science Program (HFSP grant RGP0011/2013), the Abisch-Frenkel foundation, the Pasteur-Weizmann council grant, the Minerva Foundation, the Leona M. and Harry B. Helmsley Charitable Trust, and by a Deutsch-Israelische Projektkooperation (DIP) grant from the DFG. The ISPC is supported by the Dana and Yossie Holander Center for Structural Proteomics. Author contributions -Z.E. directly performed or was involved in all experiments unless otherwise stated. I.S.L. performed conditioned media and proteinase K assays. S.D. annotated phi3T genome. A.S. analysed the mass spectrometry results. Y.P. and S.A. expressed and purified AimR–6×His. A.S.A., A.L. and S.M. constructed strains. G.A. performed microscale thermophoresis, crosslinking and ChIP–seq experiments. M.S. performed RNA-seq experiments. R.S. supervised the project.
PY - 2017/1/26
Y1 - 2017/1/26
N2 - Temperate viruses can become dormant in their host cells, a process called lysogeny. In every infection, such viruses decide between the lytic and the lysogenic cycles, that is, whether to replicate and lyse their host or to lysogenize and keep the host viable. Here we show that viruses (phages) of the SPbeta group use a small-molecule communication system to coordinate lysis-lysogeny decisions. During infection of its Bacillus host cell, the phage produces a six aminoacids-long communication peptide that is released into the medium. In subsequent infections, progeny phages measure the concentration of this peptide and lysogenize if the concentration is sufficiently high. We found that different phages encode different versions of the communication peptide, demonstrating a phage-specific peptide communication code for lysogeny decisions. We term this communication system the 'arbitrium' system, and further show that it is encoded by three phage genes: aimP, which produces the peptide; aimR, the intracellular peptide receptor; and aimX, a negative regulator of lysogeny. The arbitrium system enables a descendant phage to 'communicate' with its predecessors, that is, to estimate the amount of recent previous infections and hence decide whether to employ the lytic or lysogenic cycle.
AB - Temperate viruses can become dormant in their host cells, a process called lysogeny. In every infection, such viruses decide between the lytic and the lysogenic cycles, that is, whether to replicate and lyse their host or to lysogenize and keep the host viable. Here we show that viruses (phages) of the SPbeta group use a small-molecule communication system to coordinate lysis-lysogeny decisions. During infection of its Bacillus host cell, the phage produces a six aminoacids-long communication peptide that is released into the medium. In subsequent infections, progeny phages measure the concentration of this peptide and lysogenize if the concentration is sufficiently high. We found that different phages encode different versions of the communication peptide, demonstrating a phage-specific peptide communication code for lysogeny decisions. We term this communication system the 'arbitrium' system, and further show that it is encoded by three phage genes: aimP, which produces the peptide; aimR, the intracellular peptide receptor; and aimX, a negative regulator of lysogeny. The arbitrium system enables a descendant phage to 'communicate' with its predecessors, that is, to estimate the amount of recent previous infections and hence decide whether to employ the lytic or lysogenic cycle.
UR - https://www.scopus.com/pages/publications/85012157574
U2 - 10.1038/nature21049
DO - 10.1038/nature21049
M3 - Article
SN - 0028-0836
VL - 541
SP - 488
EP - 493
JO - Nature
JF - Nature
IS - 7638
ER -