TY - JOUR
T1 - Cellular heterogeneity mediates inherent sensitivity-specificity tradeoff in cancer targeting by Synthetic circuits
AU - Morel, Mathieu
AU - Shtrahman, Roman
AU - Rotter, Varda
AU - Nissim, Lior
AU - Bar-Ziv, Roy H.
N1 - Funding Information: We thank Prof. Takeharu Nagai (Osaka University) who kindly provided the Sirius gene. M.M. acknowledges the Dean of Faculty Fellowship (Weizmann Institute).
PY - 2016/7/19
Y1 - 2016/7/19
N2 - Synthetic gene circuits are emerging as a versatile means to target cancer with enhanced specificity by combinatorial integration of multiple expression markers. Such circuits must also be tuned to be highly sensitive because escape of even a few cells might be detrimental. However, the error rates of decision-making circuits in light of cellular variability in gene expression have so far remained unexplored. Here, we measure the single-cell response function of a tunable logic AND gate acting on two promoters in heterogeneous cell populations. Our analysis reveals an inherent tradeoff between specificity and sensitivity that is controlled by the AND gate amplification gain and activation threshold. We implement a tumor-mimicking cellculture model of cancer cells emerging in a background of normal ones, and show that molecular parameters of the synthetic circuits control specificity and sensitivity in a killing assay. This suggests that, beyond the inherent tradeoff, synthetic circuits operating in a heterogeneous environment could be optimized to efficiently target malignant state with minimal loss of specificity.
AB - Synthetic gene circuits are emerging as a versatile means to target cancer with enhanced specificity by combinatorial integration of multiple expression markers. Such circuits must also be tuned to be highly sensitive because escape of even a few cells might be detrimental. However, the error rates of decision-making circuits in light of cellular variability in gene expression have so far remained unexplored. Here, we measure the single-cell response function of a tunable logic AND gate acting on two promoters in heterogeneous cell populations. Our analysis reveals an inherent tradeoff between specificity and sensitivity that is controlled by the AND gate amplification gain and activation threshold. We implement a tumor-mimicking cellculture model of cancer cells emerging in a background of normal ones, and show that molecular parameters of the synthetic circuits control specificity and sensitivity in a killing assay. This suggests that, beyond the inherent tradeoff, synthetic circuits operating in a heterogeneous environment could be optimized to efficiently target malignant state with minimal loss of specificity.
KW - Cancer gene therapy
KW - Cell-state targeting
KW - Cellular heterogeneity
KW - Mammalian synthetic biology
KW - Synthetic gene circuits
UR - http://www.scopus.com/inward/record.url?scp=84978886093&partnerID=8YFLogxK
U2 - 10.1073/pnas.1604391113
DO - 10.1073/pnas.1604391113
M3 - مقالة
C2 - 27385823
SN - 0027-8424
VL - 113
SP - 8133
EP - 8138
JO - Proceedings of the National Academy of Sciences of the United States of America
JF - Proceedings of the National Academy of Sciences of the United States of America
IS - 29
ER -