A versatile genome-scale PCR-based pipeline for high-definition DNA FISH

Magda Bienko, Nicola Crosetto, Leonid Teytelman, Sandy Klemm, Shalev Itzkovitz, Alexander Van Oudenaarden

Research output: Contribution to journalArticlepeer-review

Abstract

We developed a cost-effective genome-scale PCR-based method for high-definition DNA FISH (HD-FISH). We visualized gene loci with diffraction-limited resolution, chromosomes as spot clusters and single genes together with transcripts by combining HD-FISH with single-molecule RNA FISH. We provide a database of over 4.3 million primer pairs targeting the human and mouse genomes that is readily usable for rapid and flexible generation of probes.

Original languageEnglish
Pages (from-to)122-124
Number of pages3
JournalNature Methods
Volume10
Issue number2
DOIs
StatePublished - Feb 2013
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Biochemistry
  • Biotechnology
  • Cell Biology

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