A-to-I RNA editing in the earliest-diverging eumetazoan phyla

Hagit T. Porath, Amos A. Schaffer, Paulina Kaniewska, Shahar Alon, Eli Eisenberg, Joshua Rosenthal, Erez Y. Levanon, Oren Levy

Research output: Contribution to journalArticlepeer-review

Abstract

The highly conservedADARenzymes, found in allmulticellularmetazoans, catalyze the editing ofmRNAtranscripts by the deamination of adenosines to inosines. This type of editing has two general outcomes: site specific editing,which frequently leads to recoding, and clustered editing, which is usually found in transcribed genomic repeats. Here, for the first time, we looked for both editing of isolated sites and clustered, non-specific sites in a basalmetazoan, the coral Acropora millepora during spawning event, in order to reveal its editing pattern.We found that the coral editome resembles the mammalian one: it contains more than 500,000 sites, virtually all of which are clustered in non-coding regions that are enriched for predicted dsRNA structures. RNA editing levels were increased during spawning and increased further still in newly released gametes. This may suggest that editing plays a role in introducing variability in coral gametes.

Original languageEnglish
Pages (from-to)1890-1901
Number of pages12
JournalMolecular Biology and Evolution
Volume34
Issue number8
Early online date8 Apr 2017
DOIs
StatePublished - 1 Aug 2017

Keywords

  • ADAR
  • Coral
  • Evolution
  • RNA editing

All Science Journal Classification (ASJC) codes

  • Genetics
  • Ecology, Evolution, Behavior and Systematics
  • Molecular Biology

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