A Python library for probabilistic analysis of single-cell omics data

Adam Gayoso; Romain Lopez; Galen Xing; Pierre Boyeau; Valeh Valiollah Pour Amiri; Justin Hong; Katherine Wu; Michael Jayasuriya; Edouard Mehlman; Maxime Langevin; Yining Liu; Jules Samaran; Gabriel Misrachi; Achille Nazaret; Oscar Clivio; Chenling Xu; Tal Ashuach; Mariano Gabitto; Mohammad Lotfollahi; Valentine Svensson; Eduardo da Veiga Beltrame; Vitalii Kleshchevnikov; Carlos Talavera-López; Lior Pachter; Fabian J Theis; Aaron Streets; Michael I Jordan; Jeffrey Regier; Nir Yosef

doi:10.1038/s41587-021-01206-w

A Python library for probabilistic analysis of single-cell omics data

Adam Gayoso, Romain Lopez, Galen Xing, Pierre Boyeau, Valeh Valiollah Pour Amiri, Justin Hong, Katherine Wu, Michael Jayasuriya, Edouard Mehlman, Maxime Langevin, Yining Liu, Jules Samaran, Gabriel Misrachi, Achille Nazaret, Oscar Clivio, Chenling Xu, Tal Ashuach, Mariano Gabitto, Mohammad Lotfollahi, Valentine SvenssonEduardo da Veiga Beltrame, Vitalii Kleshchevnikov, Carlos Talavera-López, Lior Pachter, Fabian J Theis, Aaron Streets, Michael I Jordan, Jeffrey Regier, Nir Yosef

Research output: Contribution to journal › Letter › peer-review

Abstract

NA

Original language	English
Pages (from-to)	163-166
Number of pages	4
Journal	Nature biotechnology
Volume	40
Issue number	2
DOIs	https://doi.org/10.1038/s41587-021-01206-w
State	Published - 7 Feb 2022
Externally published	Yes

All Science Journal Classification (ASJC) codes

Biotechnology
Bioengineering
Applied Microbiology and Biotechnology
Molecular Medicine
Biomedical Engineering

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Gayoso, A., Lopez, R., Xing, G., Boyeau, P., Valiollah Pour Amiri, V., Hong, J., Wu, K., Jayasuriya, M., Mehlman, E., Langevin, M., Liu, Y., Samaran, J., Misrachi, G., Nazaret, A., Clivio, O., Xu, C., Ashuach, T., Gabitto, M., Lotfollahi, M., ... Yosef, N. (2022). A Python library for probabilistic analysis of single-cell omics data. Nature biotechnology, 40(2), 163-166. https://doi.org/10.1038/s41587-021-01206-w

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title = "A Python library for probabilistic analysis of single-cell omics data",

abstract = "NA",

author = "Adam Gayoso and Romain Lopez and Galen Xing and Pierre Boyeau and {Valiollah Pour Amiri}, Valeh and Justin Hong and Katherine Wu and Michael Jayasuriya and Edouard Mehlman and Maxime Langevin and Yining Liu and Jules Samaran and Gabriel Misrachi and Achille Nazaret and Oscar Clivio and Chenling Xu and Tal Ashuach and Mariano Gabitto and Mohammad Lotfollahi and Valentine Svensson and {da Veiga Beltrame}, Eduardo and Vitalii Kleshchevnikov and Carlos Talavera-L{\'o}pez and Lior Pachter and Theis, {Fabian J} and Aaron Streets and Jordan, {Michael I} and Jeffrey Regier and Nir Yosef",

year = "2022",

month = feb,

day = "7",

doi = "10.1038/s41587-021-01206-w",

language = "الإنجليزيّة",

volume = "40",

pages = "163--166",

journal = "Nature biotechnology",

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Gayoso, A, Lopez, R, Xing, G, Boyeau, P, Valiollah Pour Amiri, V, Hong, J, Wu, K, Jayasuriya, M, Mehlman, E, Langevin, M, Liu, Y, Samaran, J, Misrachi, G, Nazaret, A, Clivio, O, Xu, C, Ashuach, T, Gabitto, M, Lotfollahi, M, Svensson, V, da Veiga Beltrame, E, Kleshchevnikov, V, Talavera-López, C, Pachter, L, Theis, FJ, Streets, A, Jordan, MI, Regier, J & Yosef, N 2022, 'A Python library for probabilistic analysis of single-cell omics data', Nature biotechnology, vol. 40, no. 2, pp. 163-166. https://doi.org/10.1038/s41587-021-01206-w

TY - JOUR

T1 - A Python library for probabilistic analysis of single-cell omics data

AU - Gayoso, Adam

AU - Lopez, Romain

AU - Xing, Galen

AU - Boyeau, Pierre

AU - Valiollah Pour Amiri, Valeh

AU - Hong, Justin

AU - Wu, Katherine

AU - Jayasuriya, Michael

AU - Mehlman, Edouard

AU - Langevin, Maxime

AU - Liu, Yining

AU - Samaran, Jules

AU - Misrachi, Gabriel

AU - Nazaret, Achille

AU - Clivio, Oscar

AU - Xu, Chenling

AU - Ashuach, Tal

AU - Gabitto, Mariano

AU - Lotfollahi, Mohammad

AU - Svensson, Valentine

AU - da Veiga Beltrame, Eduardo

AU - Kleshchevnikov, Vitalii

AU - Talavera-López, Carlos

AU - Pachter, Lior

AU - Theis, Fabian J

AU - Streets, Aaron

AU - Jordan, Michael I

AU - Regier, Jeffrey

AU - Yosef, Nir

PY - 2022/2/7

Y1 - 2022/2/7

N2 - NA

AB - NA

UR - http://www.scopus.com/inward/record.url?scp=85124370073&partnerID=8YFLogxK

U2 - 10.1038/s41587-021-01206-w

DO - 10.1038/s41587-021-01206-w

M3 - رسالة

C2 - 35132262

SN - 1087-0156

VL - 40

SP - 163

EP - 166

JO - Nature biotechnology

JF - Nature biotechnology

IS - 2

ER -

A Python library for probabilistic analysis of single-cell omics data

Abstract

All Science Journal Classification (ASJC) codes

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