Isana Veksler-Lublinsky – Research output — Israeli Research Community Portal

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Research activity per year

29 Article
1 Chapter
1 Review article

31 results

2024

Benchmarking the negatives: Effect of negative data generation on the classification of miRNA-mRNA interactions
Cohen-Davidi, E. & Veksler-Lublinsky, I., 1 Aug 2024, In: PLoS Computational Biology. 20, 8, e1012385.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Circulating isomiRs May Be Superior Biomarkers Compared to Their Corresponding miRNAs: A Pilot Biomarker Study of Using isomiR-Ome to Detect Coronary Calcium-Based Cardiovascular Risk in Patients with NAFLD
Makarenkov, N., Yoel, U., Haim, Y., Pincu, Y., Bhandarkar, N. S., Shalev, A., Shelef, I., Liberty, I. F., Ben-Arie, G., Yardeni, D., Rudich, A., Etzion, O. & Veksler-Lublinsky, I., 1 Jan 2024, In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 25, 2, 890.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Circulating miRNAs Detect High vs Low Visceral Adipose Tissue Inflammation in Patients Living With Obesity
Makarenkov, N., Haim, Y., Yoel, U., Pincu, Y., Tarnovscki, T., Liberty, I. F., Kukeev, I., Baraf, L., Dukhno, O., Zilber, O., Blüher, M., Rudich, A. & Veksler-Lublinsky, I., 1 Mar 2024, In: Journal of Clinical Endocrinology and Metabolism. 109, 3, p. 858-867 10 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review
Empowering prediction of miRNA–mRNA interactions in species with limited training data through transfer learning
Hadad, E., Rokach, L. & Veksler-Lublinsky, I., 15 Apr 2024, In: Heliyon. 10, 7, e28000.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Interplay between hippocampal TACR3 and systemic testosterone in regulating anxiety-associated synaptic plasticity
Wojtas, M. N., Diaz-González, M., Stavtseva, N., Shoam, Y., Verma, P., Buberman, A., Izhak, I., Geva, A., Basch, R., Ouro, A., Perez-Benitez, L., Levy, U., Borcel, E., Nuñez, Á., Venero, C., Rotem-Dai, N., Veksler-Lublinsky, I. & Knafo, S., 1 Mar 2024, In: Molecular Psychiatry. 29, 3, p. 686-703 18 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
2023
A large-scale phylogeny-guided analysis of pseudogenes in Pseudomonas aeruginosa bacterium
Cohen, N. & Veksler-Lublinsky, I., 26 Sep 2023, In: Microbiology spectrum. 11, 5, 15 p., e0170423.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Applying CVSS to Vulnerability Scoring in Cyber-Biological Systems
Puzis, R. & Veksler-Lublinsky, I., 1 Jan 2023, Cyberbiosecurity: A New Field to Deal with Emerging Threats. p. 115-134 20 p.
Ben-Gurion University of the Negev
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
OffRisk: A docker image for annotating CRISPR off-target sites in the human genome
Barkai, G. A., Malul, T., Eliaz, Y., Eyal, E. & Veksler-Lublinsky, I., 1 Jan 2023, In: Bioinformatics Advances. 3, 1, vbad138.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
sInterBase: a comprehensive database of Escherichia coli sRNA-mRNA interactions
Cohen, S., Maximof, E., Rokach, S., Tadeski, M. & Veksler-Lublinsky, I., 1 Apr 2023, In: Bioinformatics. 39, 4, btad172.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Visceral adipocyte size links obesity with dysmetabolism more than fibrosis, and both can be estimated by circulating miRNAs
Pincu, Y., Makarenkov, N., Tsitrina, A. A., Rosengarten-Levine, M., Haim, Y., Yoel, U., Liberty, I. F., Dukhno, O., Kukeev, I., Blüher, M., Veksler-Lublinsky, I. & Rudich, A., 1 Dec 2023, In: Obesity. 31, 12, p. 2986-2997 12 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
2022
Critical contribution of 3' non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA
Duan, Y., Veksler-Lublinsky, I. & Ambros, V., 26 Apr 2022, In: Cell Reports. 39, 4, 16 p., 110745.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Functional identification of microRNA-centered complexes in C. elegans
Hebbar, S., Panzade, G., Vashisht, A. A., Wohlschlegel, J. A., Veksler-Lublinsky, I. & Zinovyeva, A. Y., 3 May 2022, In: Scientific Reports. 12, 1, p. 1-27 7133.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review
Global profiling and annotation of templated isomiRs dynamics across Caenorhabditis elegans development
Panzade, G., Li, L., Hebbar, S., Veksler-Lublinsky, I. & Zinovyeva, A., 1 Jan 2022, In: RNA Biology. 19, 1, p. 928-942 15 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Visceral Adipose Tissue E2F1-miRNA206/210 Pathway Associates with Type 2 Diabetes in Humans with Extreme Obesity
Maixner, N., Haim, Y., Blüher, M., Chalifa-Caspi, V., Veksler-Lublinsky, I., Makarenkov, N., Yoel, U., Bashan, N., Liberty, I. F., Kukeev, I., Dukhno, O., Levy, D. & Rudich, A., 1 Oct 2022, In: Cells. 11, 19, 3046.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Whole-Genome Inter-Sex Variation in Russian Sturgeon (Acipenser gueldenstaedtii)
Degani, G., Nevo Sarel, M., Hajouj, A., Hurvitz, A., Veksler-Lublinsky, I. & Meerson, A., 1 Aug 2022, In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 23, 16, 9469.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
2021
Comprehensive machine-learning-based analysis of microRNA–target interactions reveals variable transferability of interaction rules across species
Ben Or, G. & Veksler-Lublinsky, I., 1 Dec 2021, In: BMC Bioinformatics. 22, 1, 264.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
Markers of genetic variation in blue gourami (Trichogaster trichopterus) as a model for labyrinth fish
Degani, G., Veksler-Lublinsky, I. & Meerson, A., 1 Mar 2021, In: Biology. 10, 3, 228.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Review article › peer-review

Open Access
minMLST: machine learning for optimization of bacterial strain typing
Cohen, S., Rokach, L., Motro, Y., Moran-Gilad, J. & Veksler-Lublinsky, I., 1 Feb 2021, In: Bioinformatics. 37, 3, p. 303-311 9 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review
Screening by Deep Sequencing Reveals Mediators of MicroRNA Tailing in C. Elegans
Vieux, K. F., Prothro, K. P., Kelley, L. H., Palmer, C., Maine, E. M., Veksler-Lublinsky, I. & McJunkin, K., 8 Nov 2021, In: Nucleic acids research. 49, 19, p. 11167-11180 14 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review
2019
Constrained Gene Block Discovery and Its Application to Prokaryotic Genomes
Engel, J., Veksler-Lublinsky, I. & Ziv-Ukelson, M., 1 Jul 2019, In: Journal of Computational Biology. 26, 7, p. 745-766 22 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
HRPK-1, a conserved KH-domain protein, modulates microRNA activity during Caenorhabditis elegans development
Li, L., Veksler-Lublinsky, I. & Zinovyeva, A., 1 Jan 2019, In: PLoS Genetics. 15, 10, e1008067.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans
Vasquez-Rifo, A., Veksler-Lublinsky, I., Cheng, Z., Ausubel, F. M. & Ambros, V., 10 Dec 2019, In: GENOME BIOLOGY. 20, 1, 270.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
2018

MicroRNA 146-5p, miR-let-7c-5p, miR-221 and miR-345-5p are differentially expressed in Respiratory Syncytial Virus (RSV) persistently infected HEp-2 cells
B, E. F., H, N., G, B., Veksler-Lublinsky, I., Rall, G., Y, S. & J, G., 2 Jun 2018, In: Virus Research. 251, p. 34-39 6 p.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review
2017

MiRNA-124 is a link between measles virus persistent infection and cell division of human neuroblastoma cells
Naaman, H., Rall, G., Matullo, C., Veksler-Lublinsky, I., Shemer-Avni, Y. & Gopas, J., 1 Oct 2017, In: PLoS ONE. 12, 10, e0187077.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
2016
Staufen negatively modulates microRNA activity in Caenorhabditis elegans
Ren, Z., Veksler-Lublinsky, I., Morrissey, D. & Ambros, V., 1 May 2016, In: G3: Genes, Genomes, Genetics. 6, 5, p. 1227-1237 11 p.
Research output: Contribution to journal › Article › peer-review

Open Access
2015
An efficient and sensitive method for preparing cDNA libraries from scarce biological samples
Sterling, C. H., Veksler-Lublinsky, I. & Ambros, V., 1 Sep 2015, In: Nucleic acids research. 43, 1, e1.
Research output: Contribution to journal › Article › peer-review

Open Access
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
Zinovyeva, A. Y., Veksler-Lublinsky, I., Vashisht, A. A., Wohlschlegel, J. A., Ambros, V. R. & Horvitz, H. R., 22 Sep 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 38, p. E5271-E5280
Research output: Contribution to journal › Article › peer-review

Open Access
2014
Circulating microRNA profiles in human patients with acetaminophen hepatotoxicity or ischemic hepatitis
Ward, J., Kanchagar, C., Veksler-Lublinsky, I., Lee, R. C., McGill, M. R., Jaeschke, H., Curry, S. C. & Ambros, V. R., 19 Aug 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 33, p. 12169-12174 6 p.
Research output: Contribution to journal › Article › peer-review

Open Access
2012
Finding quasi-modules of human and viral miRNAs: A case study of human cytomegalovirus (HCMV)
Veksler-Lublinsky, I., Shemer-Avni, Y., Meiri, E., Bentwich, Z., Kedem, K. & Ziv-Ukelson, M., 3 Dec 2012, In: BMC Bioinformatics. 13, 1, 322.
Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access
The microRNA Transcriptome of Human Cytomegalovirus (HCMV)
Meshesha, M. K., Veksler-Lublinsky, I., Isakov, O., Reichenstein, I., Shomron, N., Kedem, K., Ziv-Ukelson, M., Bentwich, Z. & Avni, Y. S., 2012, In: The open virology journal. 6, p. 38-48 11 p.
Ben-Gurion University of the Negev, Tel Aviv University
Research output: Contribution to journal › Article › peer-review
2011
Composite effects of gene determinants on the translation speed and density of ribosomes
Tuller, T., Veksler-Lublinsky, I., Gazit, N., Kupiec, M., Ruppin, E. & Ziv-Ukelson, M., 3 Nov 2011, In: GENOME BIOLOGY. 12, 11, R110.
Tel Aviv University, Ben-Gurion University of the Negev
Research output: Contribution to journal › Article › peer-review

Open Access